Package: HEssRNA 1.0.1
HEssRNA: Heritability-Based Estimation of Sample Size for RNA-Seq Data
Provides tools for estimating sample sizes primarily based on heritability, while also considering additional parameters such as statistical power and fold change. The package normalizes heritability values according to trait-specific heritability and classification to enhance accuracy in sample size estimation.
Authors:
HEssRNA_1.0.1.tar.gz
HEssRNA_1.0.1.zip(r-4.5)HEssRNA_1.0.1.zip(r-4.4)HEssRNA_1.0.1.zip(r-4.3)
HEssRNA_1.0.1.tgz(r-4.5-any)HEssRNA_1.0.1.tgz(r-4.4-any)HEssRNA_1.0.1.tgz(r-4.3-any)
HEssRNA_1.0.1.tar.gz(r-4.5-noble)HEssRNA_1.0.1.tar.gz(r-4.4-noble)
HEssRNA_1.0.1.tgz(r-4.4-emscripten)HEssRNA_1.0.1.tgz(r-4.3-emscripten)
HEssRNA.pdf |HEssRNA.html✨
HEssRNA/json (API)
| # Install 'HEssRNA' in R: |
| install.packages('HEssRNA', repos = c('https://bmgfiasri.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 3 months agofrom:cfa638629a. Checks:9 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Mar 12 2025 |
| R-4.5-win | OK | Mar 12 2025 |
| R-4.5-mac | OK | Mar 12 2025 |
| R-4.5-linux | OK | Mar 12 2025 |
| R-4.4-win | OK | Mar 12 2025 |
| R-4.4-mac | OK | Mar 12 2025 |
| R-4.4-linux | OK | Mar 12 2025 |
| R-4.3-win | OK | Mar 12 2025 |
| R-4.3-mac | OK | Mar 12 2025 |
Exports:hIndxMeanCalc4TraitspowerCalcprcesDF4modelInhousesmplSizPredsmplSizPredModel
Dependencies:abindaskpassBHBiobaseBiocGenericsBiocParallelclicodetoolscolorspacecpp11crayoncurlDelayedArrayDESeq2dplyredgeRfansifarverformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gluegtablehttrIRangesisobandjsonlitelabelinglambda.rlatticelifecyclelimmalocfitmagrittrMASSMatrixMatrixGenericsmatrixStatsmgcvmimemunsellnlmeopensslpillarpkgconfigplyrpurrrqvalueR6rbibutilsRColorBrewerRcppRcppArmadilloRdpackreshape2rlangS4ArraysS4VectorsscalessnowSparseArrayssize.fdrssizeRNAstatmodstringistringrSummarizedExperimentsystibbletidyrtidyselectUCSC.utilsutf8vctrsviridisLitewithrXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate Mean Heritability Index for Traits | hIndxMeanCalc4Traits |
| Power Calculation from gene expression data information | powerCalc |
| Process Data Frame in In-House Format for Model Building | prcesDF4modelInhouse |
| Predict Number of Replicates Based on Heritability, Power, and Fold Change | smplSizPred |
| Generate a Linear Model for Sample Size Prediction | smplSizPredModel |
